CD 1
| 1. | Deep Sea Ranch [Shinkai Bokujyou] | | |
| 2. | Mother of the Sea [Umi No Okasan] |  | |
| 3. | Encounter [Deai] | | |
| 4. | Ura Town [Ura No MacHi] | | |
| 5. | Kumiko [Kumiko-Chan] | | |
| 6. | Ponyo and Sosuke [Ponyo to Sosuke] | | |
| 7. | Empty Bucket [Karappo No Baketsu] | | |
| 8. | Flash Signal [Hakkou Shingou] | | |
| 9. | I Become Human! [Ningen Ni Naru!] | | |
| 10. | Fujimoto - Fujioka Fujimaki, Nozomi Ohashi | | |
| 11. | Little Sisters [Imouto-Tachi] | | |
| 12. | Flight of Ponyo [Ponyo No Hikou] | | |
| 13. | Sunflower House in the Storm [Arashi No Himawari No Le] | | |
| 14. | Ponyo of the Fish of the Wave [Nami No Sakana No Ponyo] | | |
| 15. | Ponyo and Sosuke 2 [Ponyo to Sosuke 2] | | |
| 16. | Lisa's House [Lisa No Ie] | | |
| 17. | New Family [Atarashii Kazoku] | | |
| 18. | Ponyo's Lullaby [Ponyo No Komori-Uta] | | |
| 19. | Lisa's Determination [Risa No Ketsui] | | |
| 20. | Granmanmale | | |
| 21. | Night of the Meteor [Nagareboshi No Yoru] | | |
| 22. | Hot-Bulb Engine Ship [Pompom-Sen] | | |
| 23. | To the Sea of Dipnorhynchus [Dipnorhynchus No Umi E] | | |
| 24. | Fleet March [Sendan March] | | |
| 25. | Baby and Ponyo [Aka-Chan to Ponyo] | | |
| 26. | Fleet March 2 [Sendan March 2] | | |
| 27. | Voyage of Sosuke [Sosuke No Koukai] | | |
| 28. | Tears of Sosuke [Sosuke No Namida] | | |
| 29. | Underwater Town [Suicyuu No MacHi] | | |
| 30. | Mother's Love [Haha No Ai] | | |
| 31. | Tunnel | | |
| 32. | Toki [Toki-San] | | |
| 33. | Little Sisters [Imouto-Tachi] | | |
| 34. | Song of Praise for Mother and the Sea [Haha to Umi No Sanka] | | |
| 35. | Finale | | |
| 36. | Ponyo by the Cliff by the Sea [Film Version] | | |
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